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FEBS Lett ; 595(17): 2248-2256, 2021 09.
Article in English | MEDLINE | ID: covidwho-1326724

ABSTRACT

The endoplasmic reticulum transmembrane protein vesicle-associated membrane protein-associated protein (VAP) plays a central role in the formation and function of membrane contact sites (MCS) through its interactions with proteins. The major sperm protein (MSP) domain of VAP binds to a variety of sequences which are referred to as FFAT-like motifs. In this study, we investigated the interactions of eight peptides containing FFAT-like motifs with the VAP-A MSP domain (VAP-AMSP ) by solution NMR. Six of eight peptides are specifically bound to VAP-A. Furthermore, we found that the RNA-dependent RNA polymerase of severe acute respiratory syndrome coronavirus 2 has an FFAT-like motif which specifically binds to VAP-AMSP as well as other FFAT-like motifs. Our results will contribute to the discovery of new VAP interactors.


Subject(s)
Coronavirus RNA-Dependent RNA Polymerase/chemistry , Peptides/chemistry , SARS-CoV-2/enzymology , Vesicular Transport Proteins/chemistry , Amino Acid Motifs , Coronavirus RNA-Dependent RNA Polymerase/metabolism , Humans , Nuclear Magnetic Resonance, Biomolecular , Peptides/metabolism , Protein Binding , SARS-CoV-2/metabolism , Vesicular Transport Proteins/metabolism
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